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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920590.1_cds_XP_016469693.1_62219
CDS Infomation

[gene=LOC107792030] [db_xref=GeneID:107792030] [protein=RNA polymerase sigma factor sigD, chloroplastic-like] [protein_id=XP_016469693.1] [location=complement(join(53974..54255,55009..55209,55585..55725,55819..56049,57383..57778))] [gbkey=CDS]
Sequence

ATGGCCATGGCTGCGTGGTCATGTTCAAACCAATCTCCAGCTTCACTCTTTCCTTATCCT
TCAAAATTCTCTACTAAACCCCTCATCCATTATCACCCTCTAGCAATTCTCTATTGCCCC
AAAAATGGTTCTTTTTTGGACCCAAGTCATGCATTGGCAATTGAAGCAAAATCTTTGTTT
TTTGAAACCGATATTGAGGAGGAGAGTAGCAGTAAGATTGAGATTATTAATGAGAAGATT
GAGTTAGCATTGAGAAGAAAGAAAAGGAGGAAAAGAAGGTGTTATTCAGAATTTTTGGAC
ATGGAGAAAGAGGATAAGATTTCCATTTCTAAACCTGTAAAGACAGGTCTCTACTTGACC
CTTAAGGAAGAGTCAGAGTATTCTTGGTATCTCAAGGAAGAAGCAAGAATCGAGACATTG
AGAAAGAGGGTTGAGGAAACAAGTGAGATTGAACTAAATCCAAATCAATTAGCTAAGGCT
GCAGGAATGAGCAGAAGAAGGCTAGATAAGCTCTTGGTTAATGCTAAGATATCACAAAAG
AAGATAATTAAATGCTATAGAGGGCTTGTTGTATCGGTTGCAGCTTCATATCAAGGCAAA
GGATTAAGCTTACAAGATCTAATTCAGGAAGGAAGCATAGGTCTACTTCATGGTGCTAAG
AAGTTTAATCCTAAGAAGGGTTATAAGCTCTCTACTTATGCTTATTGGTGGATTAGGCAA
GCTATTACTAGAGCCATAGCAAACAAGTCTAGAGTTATAAGATTACCGGGGAGTATATCT
GAGCTTGTGCCAAAGATTTGCAACGCGAACACTGAGTTAAGCAGAAAGCTTCGGCGAATG
CCTTCCTACGATGAAATTGCAGAAGCTCTTGATATGGATGTTTCAACTGTTAGACTAGTT
ATCGAGAGAAACCGAGCACCAATTTCCATTGATCAAATAGTAACTAGCAAAGGCTACATG
TCATTGCAGGATATCATATCAGGGCCTGAAGATATAATACCAGAAGAAATTGTGAAAAGA
CAAATGATGAAACAAGACCTGGAGAAGCTTCTGCACAATGTGTTATGTGATAGAGAAGCA
AAGATTCTGAAATTGCACTTTGGCCTCAATGGAGATACCCCTCAATCTTTTGAGGAGATT
GGAAAAGTACTTAAGCTTTCGAGAGAAAGGATCAGACAGATTAATTGCACTGCCTTGTCA
AAATTAAGAGAAAGTACTATGTTAGACAGCTTTAAAATGTACATAACATGA

Peptide Sequence

PEP ID

XP_016469693.1
PEP Infomation

PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like [Nicotiana tabacum]
Sequence

MAMAAWSCSNQSPASLFPYPSKFSTKPLIHYHPLAILYCPKNGSFLDPSHALAIEAKSLF
FETDIEEESSSKIEIINEKIELALRRKKRRKRRCYSEFLDMEKEDKISISKPVKTGLYLT
LKEESEYSWYLKEEARIETLRKRVEETSEIELNPNQLAKAAGMSRRRLDKLLVNAKISQK
KIIKCYRGLVVSVAASYQGKGLSLQDLIQEGSIGLLHGAKKFNPKKGYKLSTYAYWWIRQ
AITRAIANKSRVIRLPGSISELVPKICNANTELSRKLRRMPSYDEIAEALDMDVSTVRLV
IERNRAPISIDQIVTSKGYMSLQDIISGPEDIIPEEIVKRQMMKQDLEKLLHNVLCDREA
KILKLHFGLNGDTPQSFEEIGKVLKLSRERIRQINCTALSKLRESTMLDSFKMYIT

Transcript Sequence

Gene sequence data has not been registered.